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Apple Tree Rootstocks Explained: How to customize your apple tree for your unique conditions.

Published: April 8, 2024
Man holds bucket of apple tree rootstocks to be used for grafting new fruit trees.
Harry Burton of Apple Luscious Orchards on Salt Spring Island with a bucket of apple tree rootstocks for grafting. The root stock you choose will determine how large your tree will be when mature and much more. Photo credit: OrchardPeople.com.

Have you ever wondered why one person's apple tree shoots up, reaching impressive heights in no time, while someone else's, planted with the exact same cultivar, takes its sweet time to grow and bear fruit? It's not magic or luck; it's all about the rootstock. 

The choice of apple tree rootstock plays an important role in the tree's growth and fruit production. With so many options available, choosing the right rootstock can be a game-changer so in this article we will explore the different apple tree rootstocks available to help you choose one that will give you the ideal tree for your garden. 

People lowering a bare root apple tree into a hole in the ground to plant it. You can see the rootstock has a stem that is thicker than the upper part of the tree. Apple Tree Rootstock.
Most apple trees are grafted. Here you can see the rootstock in the planting hole. It has been grafted together with a cutting from a compatible tree that produces the type of fruit you want to grow. That fruit wood (Called scion wood) is the thinner, upper part of the tree that will become the tree's trunk. Photo credit: OrchardPeople.com.

What is apple tree rootstock? 

Apple tree rootstock refers to the lower part of an apple tree onto which a different apple variety (the scion) is grafted. The rootstock determines many of the tree's characteristics, while the scion determines the apple cultivar or the type of fruit the tree will bear. Nurseries use fruit tree grafting to merge the scion and rootstock together to create a single tree. 

But what’s the point? Why bother merging two trees together when you can just grow an apple tree from seed? Well, when you grow an apple tree from seed, the resulting tree will be genetically unique. It will probably not produce fruit that looks or tastes like the apple that the seeds came from. Grafting ensures that the fruit will be identical to the variety of the scion used.

Not only do apple trees grafted onto rootstocks give you a predictable harvest, they have other benefits too including:  

  • Size control: Some rootstocks will help you keep your fruit tree small so that it’s easy to care for, prune and harvest. 
  • Disease resistance: Some apple tree rootstocks are resistant to common apple tree diseases like phytophthora, viruses and fire blight, making the tree easier to grow successfully. 
  • Soil adaptability: Some rootstocks have been selected to thrive in heavy clay soil while others might be drought resistant. 
  • Early fruiting: Apple trees grown from seed can take up to a decade to produce fruit. But some apple rootstocks speed up the process, allowing you to enjoy your first harvest two or three years after planting your tree. 
  • Cold hardiness: Cold weather can be hard on fruit trees! Cold hardy rootstocks are helpful for those who live in colder, Northern climates.
  • Yield efficiency: Many dwarfing rootstocks limit tree growth and instead channel saved nutrients into producing fruit rather than wood!
  • Woolly apple aphid resistance: This insect feeds on the roots of fruit trees and migrates up each year into the top parts of the trees. Some rootstocks are resistant to this pest.

So how do you choose an apple tree rootstock for your garden? For the home grower, the first question to ask is how large you want your apple tree to be when it is mature. 

Man in a planting with rootstocks growing around him.
Eric Hambly, owner of Siloam Orchards in Uxbridge, Ontario, in a stool bed where he is growing rootstocks for fruit trees. An apple tree rootstock will determine the size of the tree when it is mature. Photo credit: OrchardPeople.com.

Rootstocks are divided into three classes: Dwarf, semi-dwarf, and standard.

Dwarf Apple Tree Rootstocks

Apple trees grafted onto dwarf apple rootstocks grow to be between 25% and 45% the size of a full-sized tree at maturity. So they may never grow to be taller than 6-12 feet (2-3.5 meters). This is wonderful if you have a small garden. 

But the downside is that while a full sized apple tree can live for 100 years or more, a dwarfing apple tree may live and be fruitful for just 15-20 years. And dwarfing apple trees can be fragile and need to be trellised or staked.  

But here are the benefits of dwarfing apple tree rootstocks.

  • Dwarf apple tree rootstocks are used in commercial orchards because they are easy to harvest and can produce a lot of fruit per square foot when they are densely planted.
  • Dwarf apple tree rootstocks are “precocious,” meaning that they can start to bear fruit as young as 1-2 years old.
  • Apple trees on dwarfing rootstocks stay small even when they are mature so they are easy to prune, spray for pests and diseases, and harvest efficiently.
  • Examples of dwarf rootstocks include M.9, Bud.9, and G.11. 
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Semi Dwarf Apple Tree Rootstocks

Semi-dwarf trees are ideal for growers who want a vigorous, sturdy tree but don’t have space for a full size apple tree. They range from 50% to 75% the size of a standard apple tree, or 12 to 20 feet tall (3.5-6 meters).

M9? G41? Apple Rootstocks Explained with John Strang ( EPS # 88)
Watch this video interview with John Strang about apple tree roostocks.

And semi-dwarf apple tree rootstocks have lots of benefits too. 

  • Each individual semi-dwarf apple tree can yield more fruit than a dwarf apple. 
  • Semi-dwarf rootstocks produce strong, sturdy trees with stable graft unions, making them a safe choice in gardens and parks where people might climb trees.
  • Semi-dwarf trees can start bearing 3-5 years after planting, which is much faster than trees planted on seedling rootstocks
  • The most common semi-dwarf apple rootstock is MM111.
Three images of apple trees. On the left, very small trees are grown supported by trellises. They are on dwarfing rootstocks. In the middle is a large freestanding apple tree that is dormant in winter. It is on a semi-dwarf rootstock. On the right is an heirloom apple tree on a standard roostock and it towers over a nearby house and car. Apple tree rootstocks.
Left: 2 year old tall spindle style apple tree (pixie crunch) on G935 dwarfing rootstocks will never get very large. Middle: 17 year old central leader tree on M7 semi-dwarfing rootstock, Right: This apple tree is 80+ years old. Apple trees grafted onto standard (full-sized) rootstocks can live a long time. Photo credits: John Strang, Retired Extension Fruit and Vegetable Specialist from the University of Kentucky,

Standard or Full Sized Apple Tree Rootstocks

Standard rootstocks have the same size range as apple trees grown from seed which means that they can grow up to 40 feet tall! 

  • Standard apple tree rootstocks will have huge root systems which make them strong, stable and able to live a very long time. 
  • Some standard apple tree rootstocks have excellent cold tolerance. One of the most popular is a Russian rootstock called Antanovka.
  • Long lived apple trees like this are wonderful for the environment because as they get older they sequester more carbon, helping to mitigate the effects of climate change. Older trees also develop complex ecosystems around them supporting a variety of organisms including birds, insects and fungi. 
Wooly apple aphids on a stem of an apple tree. apple tree rootstock
Rootstocks that are resistant to wooly apple aphids help keep pest numbers low by removing sites where the bugs overwinter, making them a great choice for a low or no-spray orchard. Photo credit: John Strang.

Apple tree rootstocks and pest/disease resistance

Once you know what size you want your tree to be when it’s mature, it’s good to whittle down your choice by choosing a rootstock that also offers resistance to common fruit tree diseases. 

Here are a few of of the problems that your choice of apple tree rootstock can help you with. 

  • Wooly apple aphids live on the root system of the tree for most of the year. In the spring, they migrate up to the top of the tree to suck nutrients out of the new growth. 
  • Fire blight is a bacterial disease that infects trees while they bloom. Resistant rootstocks can help keep the disease from being fatal.
  • Phytophthora,  also called crown root rot, is a fungal disease that thrives in wet soil. It kills trees quickly just as they get old enough for full production. 
Three views of an apple tree with fire blight. This tree is on G41 dwarfing rootstock. The affected branches look dry and dead.
Caption: Even though G41 dwarfing apple tree rootstock is very resistant to fire blight, trees can still contract the disease since the rootstock does not confer resistance to the scion variety (the top part of the tree). Above Rosalee apples on G.41 rootstock. The dead looking branches are a sign of fire blight. Photo credit: John Strang.

While these rootstocks can be very effective, disease resistant doesn’t mean that the tree will be immune. If the conditions are right, it may become infected.

Scroll through the chart below to see a comparison of various apple rootstocks and their resistance to pests and diseases including wooly apple aphids and fire blight.

The source of the data below is "Pest susceptibility of common apple cultivars and rootstocks" by Kristy Grigg-McGuffin, OMAFRA Apple IPM Specialist. In Fruit & Vegetable Magazine, Feb 2024. In the spreadsheet S stands for "susceptible" and VS is "very susceptible", T means "tolerant" and R means "resistant".

You can dig into lots of detail about the various types of apple tree rootstocks available in this podcast interview on apple tree rootstocks with John Strang, Retired Extension Fruit and Vegetable Specialist from the University of Kentucky. 

How to find the best apple rootstock for your tree

If you buy your new apple tree from a big box store or garden center, you may not be able to find out what type of rootstock the tree is grafted onto. 


So your best bet is to source your tree from a specialist fruit tree nursery. Their catalog will outline what rootstock the tree is on and the final size you can expect it to be.

Before you make your final decision, there are other things you will want to consider including the tree’s hardiness zone, pollination requirements and other factors. You can learn more about that in Orchard People’s online course Researching Fruit Trees for Organic Growing Success

And one more thing to consider: the best rootstock for your apple tree may be the one you graft yourself! Check out Orchard People’s guide to grafting your own fruit trees.  

Susan Poizner

Director, OrchardPeople.com Fruit Tree Care Education Online

Susan Poizner is an urban orchardist in Toronto, Canada and the author of three books on fruit tree care including Grow Fruit Trees Fast, Growing Urban Orchards, and Fruit Tree Grafting for Everyone. Susan trains new growers worldwide through her award-winning fruit tree care training program at Orchardpeople.com. Susan is also the host of the Orchard People radio show and podcast and is an ISA Certified Arborist.

Susan Poizner and the cover of her eBook Grow Fruit Trees That Thrive

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Sign up for our monthly newsletter and we will send you our eBook "Growing Fruit Trees That Thrive." You can unsubscribe at any time.
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